Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913302.1_cds_XP_016463354.1_56483
CDS Infomation

[gene=LOC107786401] [db_xref=GeneID:107786401] [protein=protein tesmin/TSO1-like CXC 5] [protein_id=XP_016463354.1] [location=complement(join(24337..24587,28676..29095,30522..30616,30691..30791,31087..31443,32987..33164,34679..34789,35495..35820))] [gbkey=CDS]
Sequence

ATGGAGAATAGCGAGGGAGGGGATTCTTTCCCTCCAAATAAGGCTCAATCGGAGGCGGCT
GTTTCCGCTTCTGCAGCTACTACGGGGCAGCCGCAGGTGGTTGTGGATTTTCCGGCGAAG
AAGCTGGCTAGGCAGCTGGATTTCACGGTGTTCGGTGGCAGTAGTGGTCAATCTCCGGCC
ACCGCTATGCCGGAGCAAACAAAGCAGATTCAACCGCTTGTGAAATCGATACAACTGCAA
AGGCCACAGACGCAGCAACACATGCTGTTAATGCCGACGAAACAAACTGCGGTGCCGACT
ACTCATCCTTCAATACGACCTCCTCTGAAACCAGATTCTCCAAGAGCACGGCCAAGGCAA
AGTGTTAGTGAGGTAAAAGATGGTACTCCTAAAAAGCAGAAGCAGTGTAACTGCAAACAC
TCTCGATGTCTAAAGTTGTATTGTGAATGCTTTGCATCTGGCATATACTGTGATGGGTGC
AATTGTAACAATTGTCATAATAATGTCGAAAATGAGCCTGCTAGACGTGAAGCAGTTGAA
GCTACTTTAGAGCGTAATCCACATGCATTCAGGCCTAAAATCGCCAGCAGTCCACATGGA
GCTCGAGATAATAAGGAGGAAATTGGGGATGTCTTAGTCTTGGCAAAGCATAACAAAGGA
TGCCACTGCAAGAAATCAGGTTGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATT
CTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAAGGAAGTGAGGAGAGG
CAGGCTCTTTTCCATGGAGATCATGCAAACAACATGGCATATCTCCAGCAGGCGGCAAAT
GCTGCTATCACAGGTGCCATTGGATCCTCCGGTTATGGATTATCTCCTGTGAATAAGAAA
AGAAAGGGCCAGGATCTGTTCTTCGGGTCATCAGTTAAGGAACCTGTTCACAGGCATGGA
CAATCCCAACAGGGGAACCATATCAAGGCTTCTGTCCTACCTTCATTATCTTCAGTTCCT
GGTCCTTGTGTTGGAAATACTGCAACAGTGGGTCCTTCCAAGTTTACTTACAGGTCTCTG
TTGGCAGACCTCATCCAACCACAGGATTTGAAGGAACTTTGCTCAGTTTTAGTTTTACAT
TCAGGAGAAGCAGCCAAGATGTTGGCAGATGAAAAGGATGCTTCAATGAAACAGGCTGAG
GGGCAGAGAGAAGCTTCCTTAGCTTCATCAACTCAGGAGCGAGTACAAAACCAGAAAGAT
TCTGGTACTGAGAAGGATATGCTTGACTGTTGTTCAAGTGGGGACCAAGGTGAGAAAATC
AGTGTGGAAGAGTCTAGTTTGGATGGTGCTGATGTATCAAAAAGGCCAATGTCGCCAGGG
ACGTTAGCACTAATGTGTGATGAATCACACACCATGTTTGCAGCTGCTGTTGCTTCCCCT
AATGACCTAGCGACTCTTAGCTGTAATACATCTTCTCAATTGCCCCACGGGCAGGGCACG
ACCGAGACCTATGCAGAACAGGAAAGAATCGTGTTGATGAAATTTCGTGATTGTCTTAAT
AGGCTTGTCGATTTAGGACAACTAAAAGAACGAAAATGTTCTTCAATGATCCGAGGTGCT
GACCCTGTCGATCAAAAAGATATGATTGGTAATGGTTTTACTACGACTGAAACGAGGAAT
CAGCATGATTCCTTAAACAATGGTGTTGCCAAGTCTGCTCTTCCTCAGCCAAGAACAACT
CAGTTGTTTAGTGCAGTAGTAACTACTGCTAATAATAATAATCCATTTCCTAAAGTTCAT
CGTCCAGATGAGAATGGGGATGTCAAACCAAAAATCTGA

Peptide Sequence

PEP ID

XP_016463354.1
PEP Infomation

PREDICTED: protein tesmin/TSO1-like CXC 5 [Nicotiana tabacum]
Sequence

MENSEGGDSFPPNKAQSEAAVSASAATTGQPQVVVDFPAKKLARQLDFTVFGGSSGQSPA
TAMPEQTKQIQPLVKSIQLQRPQTQQHMLLMPTKQTAVPTTHPSIRPPLKPDSPRARPRQ
SVSEVKDGTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCNNCHNNVENEPARREAVE
ATLERNPHAFRPKIASSPHGARDNKEEIGDVLVLAKHNKGCHCKKSGCLKKYCECFQANI
LCSENCKCMDCKNFEGSEERQALFHGDHANNMAYLQQAANAAITGAIGSSGYGLSPVNKK
RKGQDLFFGSSVKEPVHRHGQSQQGNHIKASVLPSLSSVPGPCVGNTATVGPSKFTYRSL
LADLIQPQDLKELCSVLVLHSGEAAKMLADEKDASMKQAEGQREASLASSTQERVQNQKD
SGTEKDMLDCCSSGDQGEKISVEESSLDGADVSKRPMSPGTLALMCDESHTMFAAAVASP
NDLATLSCNTSSQLPHGQGTTETYAEQERIVLMKFRDCLNRLVDLGQLKERKCSSMIRGA
DPVDQKDMIGNGFTTTETRNQHDSLNNGVAKSALPQPRTTQLFSAVVTTANNNNPFPKVH
RPDENGDVKPKI

Transcript Sequence

Gene sequence data has not been registered.